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Tools

We combine the best tools in chemistry and biology to study natural products

Natural product biosynthesis requires a broad range of instrumentation. This includes tools for routine molecular biology such as centrifuges and thermocyclers as well as well as tools for routine organic chemistry such as rotovaps and fume hoods. More niche tools include our bioprocess equiment, such as our three 15 L Applikon bioreactors, which allows us to grow dozens of liters of culture in a week. We also have excellent bioanalytical equipment, including a Shimadzu HPLC for preparative purifications, a Thermo LTQ XL mass spectrometer with Vanquish UPLC and an Oxford Nanopore Technologies Promethion sequencer (P2 Solo).

Instruments and Equipment

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Shimadzu HPLC

HPLC with photodiode array detector and fraction collector for preparative separations.

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Thermo LTQ XL / Vanquish UPLCMS

Unit resolution ion trap spectrometer with UPLC for natural product and enzyme discovery.

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Bioreactors

Applikon bioreactors with up to 15 L capacity with controller (IKA and Applikon), features include temperature, dissolved oxygen and pH control.

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Nanopore sequencer

Oxford Nanopore Technologies Promethion sequencer, P2 Solo format. Long-read sequencing device for tackling complex animal genomes and metagenomes. 

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Computational workstation

Computer with 32 core CPU, 256 GB RAM and graphics card for analyzing sequencing data.

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Analytical balances

Highly precise balances for measuring tiny amounts of sample.

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Laminar flow hood

Flow hood for microbiology work.

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Shaking incubators

Three MaxQ 8000 and two MaxQ 6000 shakers for microbiology.

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Nanodrop spectrophotometer

Spectrophotometer for measuring DNA and protein at microliter scale.

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Water purification system

For generating ultrapure water without ions or organic contaminants.

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Photoreactor

Rayonet photoreactor for doing chemical reactions with UVA, UVB and UVC.

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Rotovaps

For evaporating solvents.

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Speedvac

For evaporating solvents.

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Lyophilizer

For evaporating solvents.

Contact
Information

Department of Chemistry
University of South Florida

pds551 at usf.edu
4202 E. Fowler ave. 
Tampa, F.L. 33620

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